Antigen

Antigen Class

TFs and others

Antigen

CDC45

Cell type

Cell type Class

Digestive tract

Cell type

HCT 116

Primary Tissue

Colon

Tissue Diagnosis

Carcinoma

Sample

source_name

Colorectal Cancer

cell type

HCT116 cell line stably expressing WT-ORC1-3xFlag

chip antibody

anti-CDC45

treatment

Untreated

replicate

1

geo_loc_name

missing

collection_date

missing

Sequenced DNA Library

library_name

GSM6265476

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Phenol:chlorophorm Based on Blecher-Gonen et al. 2013

Sequencing Platform

instrument_model

NextSeq 2000

hg38

Number of total reads

23800855

Reads aligned (%)

90.2

Duplicates removed (%)

25.6

Number of peaks

16915 (qval < 1E-05)

hg19

Number of total reads

23800855

Reads aligned (%)

89.7

Duplicates removed (%)

25.7

Number of peaks

16876 (qval < 1E-05)